v1

latestOpenAPI 3.0.02026-07-1426037.4 KB
Strains

Strain metadata

get/api/v2.0/{database}/strains

Path parameters

databasestring required

Species database name (senterica, ecoli, yersinia, mcatarrhalis) for Salmonella, Escherichia, Yersinia, Moraxella respectively

Query parameters

commentstring
secondary_sample_accessionstring
antigenic_formulasstring
my_strainsboolean
serotypestring
countystring
only_fieldsstring[]
postcodestring
lab_contactstring
substrainsboolean
citystring
strain_namestring
collection_dateinteger
collection_monthinteger
reldateinteger
continentstring
source_detailsstring
versioninteger
latitudenumber float
assembly_barcodestring
source_nichestring
barcodestring[]

Unique barcode for Strain records, <database prefix>_<ID code> e.g. SAL_AA0001AA

uberstrainstring
sortorderstring

Order of search results: asc or desc

offsetinteger

Cursor position in results

collection_yearinteger
orderbystring

Field to order by. Default: barcode

return_allboolean
source_typestring
countrystring
regionstring
longitudenumber float
sample_accessionstring
limitinteger

Number of results per page

collection_timestring

Response

List of strains objects