Variant Data
Get all variant data
This will return an object containing all the data for all PGP-UK participants.
get/all_variant
Response
Success
Example response
{
"hex_id": "uk35C650",
"data": [
{
"test": "example",
"analysis_accession": "ERZ389530",
"study_accession": "PRJEB17529",
"secondary_study_accession": "ERP019394",
"sample_accession": "SAMEA4545245",
"secondary_sample_accession": "ERS1444424",
"analysis_title": "Variants from sample FR07961001 from the PGP_UK project",
"analysis_type": "SEQUENCE_VARIATION",
"center_name": "UCL Cancer Institute",
"first_public": "2017-02-07",
"last_updated": "2017-05-19",
"study_title": "Personal Genome Project - United Kingdom",
"tax_id": "9606",
"scientific_name": "Homo sapiens",
"analysis_alias": "FR07961001_PGP_UK",
"study_alias": "ena-STUDY-UNIVERSITY COLLEGE LONDON-31-10-2016-15:46:14:765-442",
"submitted_bytes": "1540561;132;86497812",
"submitted_md5": "737122c594f8ed045d930d13dc6aa1a5;9c30fb152058bd5e61bab4a5f1d7e568;746fe08cd1ea28b79382b68a3418172c",
"submitted_ftp": "ftp.sra.ebi.ac.uk/vol1/ERZ389/ERZ389530/FR07961001.pass.recode.vcf.gz.tbi;ftp.sra.ebi.ac.uk/vol1/ERZ389/ERZ389530/ERZ389530.md5;ftp.sra.ebi.ac.uk/vol1/ERZ389/ERZ389530/FR07961001.pass.recode.vcf.gz",
"submitted_aspera": "fasp.sra.ebi.ac.uk:/vol1/ERZ389/ERZ389530/FR07961001.pass.recode.vcf.gz.tbi;fasp.sra.ebi.ac.uk:/vol1/ERZ389/ERZ389530/ERZ389530.md5;fasp.sra.ebi.ac.uk:/vol1/ERZ389/ERZ389530/FR07961001.pass.recode.vcf.gz",
"submitted_galaxy": "ftp.sra.ebi.ac.uk/vol1/ERZ389/ERZ389530/FR07961001.pass.recode.vcf.gz.tbi;ftp.sra.ebi.ac.uk/vol1/ERZ389/ERZ389530/ERZ389530.md5;ftp.sra.ebi.ac.uk/vol1/ERZ389/ERZ389530/FR07961001.pass.recode.vcf.gz",
"sample_alias": "uk35C650",
"broker_name": "EBI",
"sample_title": "Personal Genomes Project UK Sample",
"type": "variant",
"meta_data_source": "https://www.ebi.ac.uk/ena/data/warehouse/filereport?accession=PRJEB17529&result=analysis"
}
]
}