v1

latestOpenAPI 3.0.12026-08-06107337528.9 KB

Genome

Get a genome annotation data package by genome assembly accession

Download an annotation data package including sequence and a detailed annotation report by genome assembly accession.

get/genome/accession/{accession}/annotation_report/download

Path parameters

accessionstring required

A single genome assembly accession

Query parameters

annotation_idsstring[]

Limit to one or more features annotated on the genome by specifying a number corresponding to a row_id (unstable).

symbolsstring[]

Limit to annotated features matching the given gene symbol (case-sensitive).

locationsstring[]

Limit to features annotated at a specific location on the genome, by specifying a chromosome name or accession and optional start-stop range.

gene_typesstring[]

Limit to features of a specified gene locus type.

search_textstring[]

Limit to features that match the specified gene symbol, gene name or protein name.

sort.fieldstring

sort.direction'SORT_DIRECTION_UNSPECIFIED' | 'SORT_DIRECTION_ASCENDING' | 'SORT_DIRECTION_DESCENDING'

include_annotation_typeV2GenomeAnnotationRequestAnnotationType[]

Specify which sequence files to include in the data package. Options include gene (GENOME_FASTA), transcript (RNA_FASTA), and protein (PROT_FASTA) sequences.

filenamestring

Output file name.

Response

A successful response