v1

latestOpenAPI 3.0.0BSD32026-07-1416846307.5 KB
bioentity

Returns homologs for a gene

get/bioentity/gene/{id}/homologs

Query parameters

rowsinteger

number of rows

startinteger

beginning row

facetboolean

Enable faceting

facet_fieldsstring[]

Fields to facet on

unselect_evidenceboolean

If true, excludes evidence objects in response

exclude_automatic_assertionsboolean

If true, excludes associations that involve IEAs (ECO:0000501)

fetch_objectsboolean

If true, returns a distinct set of association.objects (typically ontology terms). This appears at the top level of the results payload

use_compact_associationsboolean

If true, returns results in compact associations format

slimstring[]

Map objects up (slim) to a higher level category. Value can be ontology class ID or subset ID

evidencestring

Object id, e.g. ECO:0000501 (for IEA; Includes inferred by default) or a specific publication or other supporting object, e.g. ZFIN:ZDB-PUB-060503-2

directboolean

Set true to only include direct associations, and false to include inferred (via subclass or subclass|part of), default=False

taxonstring[]

Taxon CURIE of homolog, e.g. NCBITaxon:9606 (Can be an ancestral node in the ontology; includes inferred associations by default)

homology_type'P' | 'O' | 'LDO'

P (paralog), O (Ortholog) or LDO (least-diverged ortholog)

direct_taxonboolean

Set true to exclude inferred taxa

Response

Success

docsobject[]

solr docs

facet_countsobject

Mapping between field names and association counts

highlightingobject

Mapping between id and solr highlight

numFoundinteger

total number of associations matching query

objectsstring[]

List of distinct objects used